Real-Time PCR Data Analysis

From Ct analysis of your real-time PCR gene expression experiments, to allele cluster analysis of TaqMan® SNP Assay data, to CNV copy number determination, to HRM-curve generation, we create software that enables you to easily analyze data from your real-time PCR instrument. And all of our analysis tools have been optimized for use with TaqMan® Assays on Applied Biosystems® real-time PCR research use instruments.

 Ingenuity® iReport™

 

Gene Expression Analysis

DataAssist™ Software
DataAssist™ Software is a free, easy-to-use data analysis tool that utilizes the Comparative Ct (ΔΔCt) method to rapidly and accurately quantitate relative gene expression across a large number of genes and samples.

RealTime StatMiner® Software
RealTime StatMiner® Software from Integromics is a powerful, easy-to-use bioinformatics tool for quality control and differential expression analysis of real-time PCR data from medium to high-throughput experiments.

ExpressionSuite™ Software
ExpressionSuite™ Software is a free, easy-to-use data-analysis tool that utilizes the comparative Ct (ΔΔCt) method to rapidly and accurately quantify relative gene expression across a large number of genes and samples.

Genotyping Analysis

TaqMan® Genotyper Software
TaqMan® Genotyper Software is a free SNP genotyping data analysis tool for use with TaqMan® SNP Genotyping Assays (Predesigned, Custom & DME) in 48-, 96- & 384-well microtiter plates, and TaqMan® OpenArray® Genotyping Plates.
CopyCaller™ Software
CopyCaller™ Software is a free, easy-to-use software package for assigning target copy number based on data generated using TaqMan® Copy Number Assays.
High Resolution Melt (HRM) Software v3.0
High Resolution Melting (HRM) analysis is a post-PCR analysis method used to identify variation in nucleic acid sequences. High Resolution Melt Software v3.0 is an all-new and improved tool for analyzing HRM data.
High Resolution Melt (HRM) Software v2.0
NOTE: v2.0 is only for use with the Applied Biosystems® 7900HT Fast Real-Time PCR Instrument.
High Resolution Melting (HRM) analysis is a post-PCR analysis method used to identify variation in nucleic acid sequences.
TaqMan® Mutation Detection Software
This free tool determines the mutation status and percent mutation in samples run with castPCR™ powered TaqMan® Mutation Detection Assays.

Digital PCR Analysis

OpenArray® Digital PCR Software
OpenArray® Digital PCR Software is a free data analysis tool for use with TaqMan® OpenArray® Digital PCR products. The software provides user support throughout the experimental workflow, from experimental design through presentation of results, and features enhanced multi-plate analysis features to meet the requirements of future research.

Real-Time PCR Primer and Probe Design

Primer Express® Software
Primer Express® Software helps you design real-time PCR primers and probes for allele (SNP) discrimination and quantitation of gene expression using TaqMan® probe and SYBR® Green I dye detection.

TaqMan® Protein Assay Analysis

ProteinAssist™ Software
A free tool for analysis of data generated using TaqMan® Protein Assays. The software quickly calculates relative quantities of target proteins.

Protein Thermal Shift™ Software
In order to meet the data analysis requirements of protein melt experiments, Protein Thermal Shift™ Software was developed for analysis of protein melt fluorescent readings directly from Applied Biosystems® real-time PCR instrument files.  The software makes it easy for researchers to quickly compare the shift in Tm between different assay conditions or ligands to a reference sample,  providing a tool to screen and identify conditions that stabilize (or destabilize) a protein or ligand that binds to the protein of interest.

 

Regulatory Status: For Research Use Only. Not for use in diagnostic procedures.

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